FastML Job Status Page - FINISHED

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Running Parameters:

MSA file = User MSA
Sequence Type = AminoAcids
Tree file = User tree
Model of substitution = JTT

FastML has finished.

The sequences of the marginal reconstruction colored by probabilities with Tree (with reconstruction of indels)

The sequences of the marginal reconstruction colored by probabilities with Tree (without reconstruction of indels)

The sequences of the joint reconstruction with probabilities and Tree (without reconstruction of indels)

Output Files:

Marginal reconstruction

Sequences

• The sequences of the marginal reconstruction (including ancestral reconstruction of indels)

• The sequences of the marginal reconstruction (without ancestral reconstruction of indels)

• Create a logo of the posterior probability at ancestral node N1N2N3N4N5N6N7N8N9N10N11N12N13N14N15N16N17N18N19N20N21N22N23N24N25N26N27N28N29N30N31N32N33N34N35N36N37N38N39N40N41N42N43N44N45N46N47N48N49N50N51N52N53N54N55N56N57N58N59N60N61N62N63N64N65N66N67N68N69N70N71N72N73N74N75N76N77N78N79N80N81N82N83N84N85N86N87N88N89N90N91N92N93N94
  • Logo of the posterior probability at ancestral node N32 ('marginal' reconstruction)
  • Logo of the posterior probability at ancestral node N33 ('marginal' reconstruction)

• Generate 1025501002505001000 most likely ancestral sequences for ancestral node N1N2N3N4N5N6N7N8N9N10N11N12N13N14N15N16N17N18N19N20N21N22N23N24N25N26N27N28N29N30N31N32N33N34N35N36N37N38N39N40N41N42N43N44N45N46N47N48N49N50N51N52N53N54N55N56N57N58N59N60N61N62N63N64N65N66N67N68N69N70N71N72N73N74N75N76N77N78N79N80N81N82N83N84N85N86N87N88N89N90N91N92N93N94
  • 100-most likely ancestral sequences for ancestral node N32 ('marginal' reconstruction)
  • 100-most likely ancestral sequences for ancestral node N33 ('marginal' reconstruction)

• Sample 10255010025050010002000300040005000 sequences from the posterior distribution for ancestral node N1N2N3N4N5N6N7N8N9N10N11N12N13N14N15N16N17N18N19N20N21N22N23N24N25N26N27N28N29N30N31N32N33N34N35N36N37N38N39N40N41N42N43N44N45N46N47N48N49N50N51N52N53N54N55N56N57N58N59N60N61N62N63N64N65N66N67N68N69N70N71N72N73N74N75N76N77N78N79N80N81N82N83N84N85N86N87N88N89N90N91N92N93N94
  • 100 sequences sampled from the posterior distribution for ancestral node N32 ('marginal' reconstruction)

  • 100 sequences sampled from the posterior distribution for ancestral node N33 ('marginal' reconstruction)

Probabilities

• The probabilities of the marginal reconstruction (including ancestral reconstruction of indels)

• The probabilities of the marginal reconstruction (without ancestral reconstruction of indels)

• The probabilities of the marginal reconstruction for indels

Joint reconstruction

• The sequences of the joint reconstruction

• The probabilities of the joint reconstruction

Phylogenetic tree

• Tree in Newick format

• Tree in Ancestor format

Please report any problem in case of need.

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