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The FASTML Server
Server for computing Maximum Likelihood
ancestral sequence reconstruction
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The FASTML Server - Server for computing Maximum Likelihood ancestral sequence reconstruction

Type your multiple sequence alignment (MSA) (FASTA format only)

OR
Upload your multiple sequence alignment (MSA) file

Sequences Type: Amino Acids    Nucleotides    Codons


Type your phylogenetic tree (Optional) (Newick format only)
OR
Upload phylogenetic tree file (Newick format only)     


Model of substitution:



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Your email address will be used to update you the moment the results are ready.

              

Advanced options

Phylogenetic tree method

Optimize Branch Lengths

Use Gamma Distribution

Optimize alpha

User provide alpha:

Compute also joint reconstruction

Indel reconstruction method

Probability cutoff to prefer ancestral indel over character

Job title (Optional)
Enter a descriptive job title for your FastML query